WormBase Tree Display for Variation: WBVar00248556
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WBVar00248556 | Name | Public_name | WBVar00248556 | ||
---|---|---|---|---|---|
Other_name | snp_ZK488[4] | ||||
haw160042 | |||||
cewivar00220608 | |||||
ZK488.2.1:c.1068+52G>A | |||||
HGVSg | CHROMOSOME_V:g.612028G>A | ||||
Sequence_details | SMap | S_parent | Sequence | ZK488 | |
Flanking_sequences | tctgaaaatgatctttaaaaagctt | tccagtacggcacgggtctcaacaa | |||
Mapping_target | ZK488 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00579907 | |||
Status | Live | ||||
Affects | Gene | WBGene00003680 | |||
Transcript | ZK488.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK488.2.1:c.1068+52G>A | ||||
Intron_number | 6/7 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | Predicted SNP: Psnp=0.7349 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_ZK488.4 | |||||
[20040130 db] this Allele was previously named snp_ZK488.4 | |||||
[20090224 db] original Wicks name : ZK488:22777..23684@478 Psnp=0.7349 VarS=AG | |||||
[20090224 db] original Wicks id : eam31b05.s1@352,a,33 | |||||
Method | SNP_Wicks |