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WormBase Tree Display for Variation: WBVar00248555

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Name Class

WBVar00248555EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00248555
Other_namesnp_ZK488[3]
cewivar00220607
CE28191:p.Leu345=
ZK488.2.1:c.1033T>C
HGVSgCHROMOSOME_V:g.611941T>C
Sequence_detailsSMapS_parentSequenceZK488
Flanking_sequencesgagaacgccgagatattctggaaggtaggcaaaattatgaagatcaataa
Mapping_targetZK488
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003680
TranscriptZK488.2.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScZK488.2.1:c.1033T>C
HGVSpCE28191:p.Leu345=
cDNA_position1072
CDS_position1033
Protein_position345
Exon_number6/8
Codon_changeTta/Cta
Amino_acid_changeL
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.6508 VarS=CT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_ZK488.3
[20040130 db] this Allele was previously named snp_ZK488.3
[20090224 db] original Wicks name : ZK488:22777..23684@391 Psnp=0.6508 VarS=CT
[20090224 db] original Wicks id : eam31b05.s1@439,c,31
[20090224 db] Snip-SNP
MethodSNP_Wicks