WormBase Tree Display for Variation: WBVar00248529
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WBVar00248529 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248529 | |||
Other_name | snp_ZK337[4] | ||||
ZK337.5.1:c.610-104dup | |||||
HGVSg | CHROMOSOME_I:g.15005192dup | ||||
Sequence_details | SMap | S_parent | Sequence | ZK337 | |
Flanking_sequences | cgatttttgatgaaattttaattcc | gtttcgcggacagaataatgtcaac | |||
Mapping_target | ZK337 | ||||
Type_of_mutation | Insertion | C | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00003471 | |||
Transcript | ZK337.5.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK337.5.1:c.610-104dup | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8956 VarI1=C | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_ZK337.4 | |||||
[20040130 db] this Allele was previously named snp_ZK337.4 | |||||
[20090224 db] original Wicks name : ZK337:31290..32158@537 Psnp=0.8956 VarI1=C | |||||
[20090224 db] original Wicks id : vr79b01.s1@481,c,44 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |