WormBase Tree Display for Gene: WBGene00003471
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| WBGene00003471 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | mtd-1 | Person_evidence | WBPerson95 | |||||
| Sequence_name | ZK337.5 | ||||||||
| Molecular_name | ZK337.5 | ||||||||
| ZK337.5.1 | |||||||||
| CE24721 | |||||||||
| Other_name | CELE_ZK337.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mtd-1 | ||||||||
| DB_info | Database | AceView | gene | 1P599 | |||||
| WormQTL | gene | WBGene00003471 | |||||||
| WormFlux | gene | WBGene00003471 | |||||||
| NDB | locus_tag | CELE_ZK337.5 | |||||||
| NCBI | gene | 191285 | |||||||
| RefSeq | protein | NM_061214.9 | |||||||
| SwissProt | UniProtAcc | G5ECI1 | |||||||
| UniProt_GCRP | UniProtAcc | G5ECI1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mtd | ||||||||
| Allele (89) | |||||||||
| Strain | WBStrain00031389 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00011867 | ||||||||
| 00011868 | |||||||||
| 00011869 | |||||||||
| 00011870 | |||||||||
| 00011871 | |||||||||
| Ortholog (27) | |||||||||
| Structured_description | Concise_description | mtd-1 encodes a novel protein, with an N-terminal extracellular domain and a C-terminal transmembrane domain, that is expressed in touch receptor neurons; loss of mtd-1 function (by either RNAi or a deletion mutation) has no obvious phenotype alone, but specifically enhances touch insensitivity of the temperature-sensitive mec-6(u247). | Paper_evidence | WBPaper00005559 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 07 Jul 2004 00:00:00 | ||||||||
| Automated_description | Involved in positive regulation of detection of mechanical stimulus involved in sensory perception of touch. Located in plasma membrane. Expressed in touch receptor neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK337.5 | |||||||
| Corresponding_transcript | ZK337.5.1 | ||||||||
| Other_sequence | Name_isotig06195 | ||||||||
| HBC04259_1 | |||||||||
| EX910572.1 | |||||||||
| CJC13596_1 | |||||||||
| Hbac_isotig05294 | |||||||||
| CBC08810_1 | |||||||||
| EX916207.1 | |||||||||
| Associated_feature | WBsf643878 | ||||||||
| WBsf657153 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059348 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022754 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038261 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2285 | ||||||||
| Expr1016086 | |||||||||
| Expr1162775 | |||||||||
| Expr2013802 | |||||||||
| Expr2032042 | |||||||||
| Drives_construct | WBCnstr00010751 | ||||||||
| WBCnstr00036096 | |||||||||
| Construct_product | WBCnstr00010751 | ||||||||
| WBCnstr00036096 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | I | Position | 29.1761 | Error | 0.091432 | |||
| Positive | Positive_clone | ZK337 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4499 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005559 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
