WormBase Tree Display for Variation: WBVar00248262

WBVar00248262 Name: Public_name: WBVar00248262
    Other_name: snp_Y105C5B[20]
      haw158083
      cewivar00216262
      Y105C5B.17.1:c.40+276T>A
    HGVSg: CHROMOSOME_IV:g.15963439T>A
  Sequence_details: SMap: S_parent: Sequence: Y105C5B
    Flanking_sequences: taatgacggaggttttcttgtaaag cggttgcagtatgtcgatgagtagg
    Mapping_target: Y105C5B
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Yanai
          Million_mutation_project_reanalysis
    Person: WBPerson4037
    Analysis: SNP_Wicks
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00577948
    Status: Live
  Affects: Gene: WBGene00013656
    Transcript: Y105C5B.17.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.17.1:c.40+276T>A
        Intron_number: 2/5
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9420 VarS=AT
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y105C5B.20
    [20040130 db] this Allele was previously named snp_Y105C5B.20
    [20090224 db] original Wicks name : Y105C5B:99004..99936@713 Psnp=0.9420 VarS=AT
    [20090224 db] original Wicks id : eam36g07.s1@168,a,56
    [20090224 db] Snip-SNP
  Method: SNP_Wicks