WormBase Tree Display for Variation: WBVar00248237

WBVar00248237 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00248237
    Other_name: snp_Y105C5A[10]
      Y105C5A.17a.1:n.65+431del
      Y105C5A.17c.1:n.65+431del
      Y105C5A.17b.1:n.65+431del
    HGVSg: CHROMOSOME_IV:g.15723973del
  Sequence_details: SMap: S_parent: Sequence: Y105C5A
    Flanking_sequences: tctttaaaatttgattttttttttt ggtttttttttcaaacacaatcggt
    Mapping_target: Y105C5A
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00013640
    Transcript: Y105C5A.17a VEP_consequence: intron_variant,non_coding_transcript_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5A.17a.1:n.65+431del
        Intron_number: 1/3
      Y105C5A.17b VEP_consequence: intron_variant,non_coding_transcript_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5A.17b.1:n.65+431del
        Intron_number: 1/4
      Y105C5A.17c VEP_consequence: intron_variant,non_coding_transcript_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5A.17c.1:n.65+431del
        Intron_number: 1/5
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9221 VarD1=T
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_Y105C5.10
    [20040130 db] this Allele was previously named snp_Y105C5.10
    [20090224 db] this Variation was previously named snp_Y105C5[10]
    [20090224 db] original Wicks name : Y105C5A:174510..175417@475 Psnp=0.9221 VarD1=T
    [20090224 db] original Wicks id : yw06e09.s1@400,-,59
  Method: SNP_Wicks