WormBase Tree Display for Variation: WBVar00248030
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WBVar00248030 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00248030 | |||
Other_name | snp_Y71H2B[3] | ||||
Y71H2B.6.2:c.*167dup | |||||
Y71H2B.6.1:c.*12+155dup | |||||
HGVSg | CHROMOSOME_III:g.2599721dup | ||||
Sequence_details | SMap | S_parent | Sequence | Y71H2B | |
Flanking_sequences | tatgattttttttaaattgaaaaaa | tctcagtttttgccaaattccgatt | |||
Mapping_target | Y71H2B | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00007019 | |||
Transcript | Y71H2B.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y71H2B.6.1:c.*12+155dup | ||||
Intron_number | 5/5 | ||||
Y71H2B.6.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y71H2B.6.2:c.*167dup | ||||
cDNA_position | 775-776 | ||||
Exon_number | 5/5 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.4688 VarI1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y71H2B.3 | |||||
[20040130 db] this Allele was previously named snp_Y71H2B.3 | |||||
[20090224 db] original Wicks name : Y71H2B:21140..21738@276 Psnp=0.4688 VarI1=A | |||||
[20090224 db] original Wicks id : hz76b01.s1@273,a,29 | |||||
Method | SNP_Wicks |