WormBase Tree Display for Gene: WBGene00007019
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| WBGene00007019 | Evidence | Author_evidence | Bourbon H-M | |||||
|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y71H2B | |||||
| Identity | Version | 1 | ||||||
| Name | CGC_name | mdt-19 | ||||||
| Sequence_name | Y71H2B.6 | |||||||
| Molecular_name | Y71H2B.6 | |||||||
| Y71H2B.6.1 | ||||||||
| CE22945 | ||||||||
| Y71H2B.6.2 | ||||||||
| Other_name | CELE_Y71H2B.6 | Accession_evidence | NDB | BX284603 | ||||
| Public_name | mdt-19 | |||||||
| DB_info | Database | AceView | gene | 3D691 | ||||
| WormQTL | gene | WBGene00007019 | ||||||
| WormFlux | gene | WBGene00007019 | ||||||
| NDB | locus_tag | CELE_Y71H2B.6 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00007019|UniProtKB=Q9N4F2 | ||||||
| family | PTHR22536 | |||||||
| NCBI | gene | 175378 | ||||||
| RefSeq | protein | NM_065186.5 | ||||||
| SwissProt | UniProtAcc | Q9N4F2 | ||||||
| TREEFAM | TREEFAM_ID | TF317417 | ||||||
| UniProt_GCRP | UniProtAcc | Q9N4F2 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 14 May 2004 11:48:16 | WBPerson1845 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Gene_class | mdt | |||||||
| Allele (112) | ||||||||
| Strain | WBStrain00051452 | |||||||
| RNASeq_FPKM (74) | ||||||||
| GO_annotation | 00094511 | |||||||
| 00094512 | ||||||||
| 00094513 | ||||||||
| 00094514 | ||||||||
| 00115219 | ||||||||
| 00115220 | ||||||||
| 00115221 | ||||||||
| Ortholog (29) | ||||||||
| Structured_description | Automated_description | Predicted to enable transcription coregulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Is an ortholog of human MED19 (mediator complex subunit 19). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | Y71H2B.6 | ||||||
| Corresponding_transcript | Y71H2B.6.1 | |||||||
| Y71H2B.6.2 | ||||||||
| Other_sequence | Oden_isotig21015 | |||||||
| MJ02418 | ||||||||
| CRC08375_1 | ||||||||
| Tcir_isotig14441 | ||||||||
| CR04088 | ||||||||
| Associated_feature | WBsf658700 | |||||||
| Experimental_info | RNAi_result (19) | |||||||
| Expr_pattern | Expr1019802 | |||||||
| Expr1033009 | ||||||||
| Expr1161683 | ||||||||
| Expr2013474 | ||||||||
| Expr2031708 | ||||||||
| Microarray_results (19) | ||||||||
| Expression_cluster (71) | ||||||||
| Interaction (28) | ||||||||
| Map_info | Map | III | Position | -11.4181 | Error | 0.10716 | ||
| Positive | Positive_clone | Y71H2B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Pseudo_map_position | ||||||||
| Reference | WBPaper00006530 | |||||||
| WBPaper00027707 | ||||||||
| WBPaper00029038 | ||||||||
| WBPaper00031331 | ||||||||
| WBPaper00038491 | ||||||||
| WBPaper00048493 | ||||||||
| WBPaper00055090 | ||||||||
| WBPaper00065308 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
| Method | Gene |
