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WormBase Tree Display for Variation: WBVar00247796

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Name Class

WBVar00247796EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247796
Other_namesnp_Y57G11C[30]
Y57G11C.28.1:c.597+154G>A
HGVSgCHROMOSOME_IV:g.14930938G>A
Sequence_detailsSMapS_parentSequenceY57G11C
Flanking_sequencesatgtataaaattacaaaagcaacacgtaatttatttaaaattttagtctt
Mapping_targetY57G11C
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00014924
TranscriptY57G11C.28.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY57G11C.28.1:c.597+154G>A
Intron_number4/5
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.6024 VarS=AG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y57G11C.30
[20040130 db] this Allele was previously named snp_Y57G11C.30
[20090224 db] original Wicks name : Y57G11C:292533..294270@1134 Psnp=0.6024 VarS=AG
[20090224 db] original Wicks id : vl22a03.s1@236,a,30
MethodSNP_Wicks