WormBase Tree Display for Variation: WBVar00247796
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WBVar00247796 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247796 | |||
Other_name | snp_Y57G11C[30] | ||||
Y57G11C.28.1:c.597+154G>A | |||||
HGVSg | CHROMOSOME_IV:g.14930938G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y57G11C | |
Flanking_sequences | atgtataaaattacaaaagcaacac | gtaatttatttaaaattttagtctt | |||
Mapping_target | Y57G11C | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00014924 | |||
Transcript | Y57G11C.28.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y57G11C.28.1:c.597+154G>A | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.6024 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y57G11C.30 | |||||
[20040130 db] this Allele was previously named snp_Y57G11C.30 | |||||
[20090224 db] original Wicks name : Y57G11C:292533..294270@1134 Psnp=0.6024 VarS=AG | |||||
[20090224 db] original Wicks id : vl22a03.s1@236,a,30 | |||||
Method | SNP_Wicks |