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WormBase Tree Display for Variation: WBVar00247675

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Name Class

WBVar00247675EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247675
Other_namesnp_Y54G11B[8]
Y54G11B.1.2:c.1010+29del
Y54G11B.1.1:c.1010+29del
HGVSgCHROMOSOME_II:g.14464354del
Sequence_detailsSMapS_parentSequenceY54G11B
Flanking_sequencesTCAGCTTGTTACCATTGACAAAGTAAGATTTTCAGAAGAGAAAATTTGTTGCTTTGTAAAGGGAAAACTAACTTACATTAAAAGATCCCTGAAAAAGTCA
Mapping_targetY54G11B
Type_of_mutationDeletionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00013222
TranscriptY54G11B.1.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G11B.1.2:c.1010+29del
Intron_number7/8
Y54G11B.1.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G11B.1.1:c.1010+29del
Intron_number8/9
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9212 VarD1=T
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y54G11B.8
[20040130 db] this Allele was previously named snp_Y54G11B.8
[20090224 db] original Wicks name : Y54G11B:9141..9926@549 Psnp=0.9212 VarD1=T
[20090224 db] original Wicks id : yw09b09.s1@319,-,56
MethodSNP_Wicks