WormBase Tree Display for Gene: WBGene00013222
expand all nodes | collapse all nodes | view schema
| WBGene00013222 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dmsr-6 | Person_evidence | WBPerson260 | |||||
| Sequence_name | Y54G11B.1 | ||||||||
| Molecular_name | Y54G11B.1 | ||||||||
| Y54G11B.1.1 | |||||||||
| CE16663 | |||||||||
| Y54G11B.1.2 | |||||||||
| Other_name | CELE_Y54G11B.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dmsr-6 | ||||||||
| DB_info | Database | AceView | gene | 2O747 | |||||
| WormQTL | gene | WBGene00013222 | |||||||
| WormFlux | gene | WBGene00013222 | |||||||
| NDB | locus_tag | CELE_Y54G11B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013222|UniProtKB=G5EGR5 | |||||||
| family | PTHR46273 | ||||||||
| NCBI | gene | 190297 | |||||||
| RefSeq | protein | NM_064603.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315509 | |||||||
| TrEMBL | UniProtAcc | G5EGR5 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGR5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Dec 2011 16:46:04 | WBPerson2970 | Name_change | CGC_name | dmsr-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dmsr | ||||||||
| Allele (251) | |||||||||
| Strain | WBStrain00050972 | ||||||||
| WBStrain00055132 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00020768 | ||||||||
| 00020769 | |||||||||
| 00020770 | |||||||||
| 00020771 | |||||||||
| 00120124 | |||||||||
| 00120125 | |||||||||
| 00120126 | |||||||||
| 00120127 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54G11B.1 | |||||||
| Corresponding_transcript | Y54G11B.1.1 | ||||||||
| Y54G11B.1.2 | |||||||||
| Other_sequence | Oden_isotig24795 | ||||||||
| Acan_isotig11315 | |||||||||
| MIC00787_1 | |||||||||
| Oden_isotig21409 | |||||||||
| JI173774.1 | |||||||||
| PT02096 | |||||||||
| JI175093.1 | |||||||||
| AE00984 | |||||||||
| MI01360 | |||||||||
| MI03808 | |||||||||
| Associated_feature | WBsf658414 | ||||||||
| WBsf658415 | |||||||||
| WBsf658416 | |||||||||
| WBsf990722 | |||||||||
| WBsf990723 | |||||||||
| WBsf1013847 | |||||||||
| WBsf1013848 | |||||||||
| WBsf222465 | |||||||||
| WBsf222466 | |||||||||
| WBsf222467 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037490 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020991 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020992 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057435 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021052 | ||||||||
| Expr1160871 | |||||||||
| Expr2010973 | |||||||||
| Expr2029211 | |||||||||
| Drives_construct | WBCnstr00029722 | ||||||||
| Construct_product | WBCnstr00029722 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (126) | |||||||||
| Map_info | Map | II | Position | 23.0104 | |||||
| Positive | Positive_clone | Y54G11B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065946 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
