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WormBase Tree Display for Variation: WBVar00247603

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Name Class

WBVar00247603EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247603
Other_namesnp_Y54E10BR[4]
Y54E10BR.7.1:c.49+1048del
HGVSgCHROMOSOME_I:g.3046698del
Sequence_detailsSMapS_parentSequenceY54E10BR
Flanking_sequencesgatgtttttttttctgaaaaaaaaatgcttctgatcttttttcacaatgt
Mapping_targetY54E10BR
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00003387
TranscriptY54E10BR.7.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10BR.7.1:c.49+1048del
Intron_number1/12
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9212 VarD1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y54E10BR.4
[20040130 db] this Allele was previously named snp_Y54E10BR.4
[20090224 db] original Wicks name : Y54E10BR:31126..32020@657 Psnp=0.9212 VarD1=A
[20090224 db] original Wicks id : vr90g03.s1@194,-,56
MethodSNP_Wicks