WormBase Tree Display for Variation: WBVar00247603
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WBVar00247603 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247603 | |||
Other_name | snp_Y54E10BR[4] | ||||
Y54E10BR.7.1:c.49+1048del | |||||
HGVSg | CHROMOSOME_I:g.3046698del | ||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |
Flanking_sequences | gatgtttttttttctgaaaaaaaaa | tgcttctgatcttttttcacaatgt | |||
Mapping_target | Y54E10BR | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00003387 | |||
Transcript | Y54E10BR.7.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10BR.7.1:c.49+1048del | ||||
Intron_number | 1/12 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9212 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y54E10BR.4 | |||||
[20040130 db] this Allele was previously named snp_Y54E10BR.4 | |||||
[20090224 db] original Wicks name : Y54E10BR:31126..32020@657 Psnp=0.9212 VarD1=A | |||||
[20090224 db] original Wicks id : vr90g03.s1@194,-,56 | |||||
Method | SNP_Wicks |