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WormBase Tree Display for Variation: WBVar00247157

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Name Class

WBVar00247157EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247157
Other_namesnp_Y41E3[4]
Y41E3.3a.1:c.93+391del
Y41E3.3c.1:c.93+391del
HGVSgCHROMOSOME_IV:g.14982111del
Sequence_detailsSMapS_parentSequenceY41E3
Flanking_sequencestggttggactgaaatcaaaaaaaaatcaactgtttgtataactcaagatt
Mapping_targetY41E3
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00012763
TranscriptY41E3.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41E3.3c.1:c.93+391del
Intron_number2/10
Y41E3.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41E3.3a.1:c.93+391del
Intron_number2/11
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9091 VarD1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y41E3.4
[20040130 db] this Allele was previously named snp_Y41E3.4
[20090224 db] original Wicks name : Y41E3:30957..32503@414 Psnp=0.9091 VarD1=A
[20090224 db] original Wicks id : vd48b03.s1@397,-,47
MethodSNP_Wicks