WormBase Tree Display for Variation: WBVar00247157
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WBVar00247157 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247157 | |||
Other_name | snp_Y41E3[4] | ||||
Y41E3.3a.1:c.93+391del | |||||
Y41E3.3c.1:c.93+391del | |||||
HGVSg | CHROMOSOME_IV:g.14982111del | ||||
Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
Flanking_sequences | tggttggactgaaatcaaaaaaaaa | tcaactgtttgtataactcaagatt | |||
Mapping_target | Y41E3 | ||||
Type_of_mutation | Deletion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00012763 | |||
Transcript | Y41E3.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.3c.1:c.93+391del | ||||
Intron_number | 2/10 | ||||
Y41E3.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.3a.1:c.93+391del | ||||
Intron_number | 2/11 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9091 VarD1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y41E3.4 | |||||
[20040130 db] this Allele was previously named snp_Y41E3.4 | |||||
[20090224 db] original Wicks name : Y41E3:30957..32503@414 Psnp=0.9091 VarD1=A | |||||
[20090224 db] original Wicks id : vd48b03.s1@397,-,47 | |||||
Method | SNP_Wicks |