WormBase Tree Display for Gene: WBGene00012763
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| WBGene00012763 | SMap | S_parent | Sequence | Y41E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | atln-2 | Paper_evidence | WBPaper00042415 | |||||
| Sequence_name | Y41E3.3 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_Y41E3.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | atln-2 | ||||||||
| DB_info | Database | AceView | gene | 4P759 | |||||
| WormQTL | gene | WBGene00012763 | |||||||
| WormFlux | gene | WBGene00012763 | |||||||
| NDB | locus_tag | CELE_Y41E3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012763|UniProtKB=O62433 | |||||||
| family | PTHR10751 | ||||||||
| NCBI | gene | 189829 | |||||||
| RefSeq | protein | NM_001380543.1 | |||||||
| NM_001383251.1 | |||||||||
| NM_070408.6 | |||||||||
| NM_001380542.1 | |||||||||
| TrEMBL | UniProtAcc | O62433 | |||||||
| A0A061ACP6 | |||||||||
| A0A061AKV6 | |||||||||
| A0A061AJ70 | |||||||||
| UniProt_GCRP | UniProtAcc | O62433 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jun 2013 14:47:04 | WBPerson2970 | Name_change | CGC_name | atln-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atln | ||||||||
| Allele (274) | |||||||||
| Strain | WBStrain00032840 | ||||||||
| WBStrain00032871 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000096 | ||||||||
| 00000097 | |||||||||
| 00000098 | |||||||||
| 00000099 | |||||||||
| 00000100 | |||||||||
| 00119782 | |||||||||
| 00119783 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00021868 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00045066 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in endoplasmic reticulum organization and protein homooligomerization. Predicted to be located in membrane. Expressed in head neurons. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41E3.3a | |||||||
| Y41E3.3b | |||||||||
| Y41E3.3c | |||||||||
| Y41E3.3d | |||||||||
| Corresponding_CDS_history | Y41E3.3:wp88 | ||||||||
| Y41E3.3:wp92 | |||||||||
| Corresponding_transcript | Y41E3.3a.1 | ||||||||
| Y41E3.3b.1 | |||||||||
| Y41E3.3c.1 | |||||||||
| Y41E3.3d.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf998664 | ||||||||
| WBsf998665 | |||||||||
| WBsf1018713 | |||||||||
| WBsf1018714 | |||||||||
| WBsf019769 | |||||||||
| WBsf229546 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056411 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037006 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14262 | ||||||||
| Expr1017485 | |||||||||
| Expr1035646 | |||||||||
| Expr1159895 | |||||||||
| Expr2009507 | |||||||||
| Expr2027744 | |||||||||
| Drives_construct | WBCnstr00029850 | ||||||||
| WBCnstr00040690 | |||||||||
| WBCnstr00040691 | |||||||||
| Construct_product | WBCnstr00029850 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction | WBInteraction000296069 | ||||||||
| Map_info | Map | IV | Position | 12.7671 | |||||
| Positive | Positive_clone | Y41E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
