WormBase Tree Display for Variation: WBVar00247154
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WBVar00247154 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00247154 | |||
Other_name | snp_Y41E3[1] | ||||
cewivar00694578 | |||||
Y41E3.3a.1:c.93+252_93+253insCTCAAA | |||||
Y41E3.3c.1:c.93+252_93+253insCTCAAA | |||||
HGVSg | CHROMOSOME_IV:g.14981972_14981973insCTCAAA | ||||
Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
Flanking_sequences | taaaatcagcacgaaaacctcaatt | ttttaactttttttttgtgcttatc | |||
Mapping_target | Y41E3 | ||||
Type_of_mutation | Insertion | CTCAAA | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01968614 | |||
Status | Live | ||||
Affects | Gene | WBGene00012763 | |||
Transcript | Y41E3.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.3c.1:c.93+252_93+253insCTCAAA | ||||
Intron_number | 2/10 | ||||
Y41E3.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y41E3.3a.1:c.93+252_93+253insCTCAAA | ||||
Intron_number | 2/11 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.4158 VarI6=CTCAAA | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_Y41E3.1 | |||||
[20040130 db] this Allele was previously named snp_Y41E3.1 | |||||
[20090224 db] original Wicks name : Y41E3:30957..32503@275 Psnp=0.4158 VarI6=CTCAAA | |||||
[20090224 db] original Wicks id : vd48b03.s1@536,a,28 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |