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WormBase Tree Display for Variation: WBVar00247154

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Name Class

WBVar00247154EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00247154
Other_namesnp_Y41E3[1]
cewivar00694578
Y41E3.3a.1:c.93+252_93+253insCTCAAA
Y41E3.3c.1:c.93+252_93+253insCTCAAA
HGVSgCHROMOSOME_IV:g.14981972_14981973insCTCAAA
Sequence_detailsSMapS_parentSequenceY41E3
Flanking_sequencestaaaatcagcacgaaaacctcaattttttaactttttttttgtgcttatc
Mapping_targetY41E3
Type_of_mutationInsertionCTCAAA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01968614
StatusLive
AffectsGeneWBGene00012763
TranscriptY41E3.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41E3.3c.1:c.93+252_93+253insCTCAAA
Intron_number2/10
Y41E3.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY41E3.3a.1:c.93+252_93+253insCTCAAA
Intron_number2/11
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.4158 VarI6=CTCAAA
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_Y41E3.1
[20040130 db] this Allele was previously named snp_Y41E3.1
[20090224 db] original Wicks name : Y41E3:30957..32503@275 Psnp=0.4158 VarI6=CTCAAA
[20090224 db] original Wicks id : vd48b03.s1@536,a,28
[20090224 db] Snip-SNP
MethodSNP_Wicks