WormBase Tree Display for Variation: WBVar00246819
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WBVar00246819 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246819 | |||
Other_name | snp_Y18D10A[2] | ||||
cewivar00173669 | |||||
Y18D10A.5.1:c.939+641A>G | |||||
HGVSg | CHROMOSOME_I:g.12822867A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y18D10A | |
Flanking_sequences | cgggctcgatttttattctgcattt | ttaatcaaaaaatgagacaataata | |||
Mapping_target | Y18D10A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (16) | |||||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00001746 | |||
Transcript | Y18D10A.5.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y18D10A.5.1:c.939+641A>G | ||||
Intron_number | 4/5 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9173 VarS=AG | ||||
Enzymes. Bristol-specific: [AseI,AsnI,BpoAI,PshBI,Srl55DII,Srl65DI,Srl8DI,Sru4DI,VspI]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_Y18D10.2 | |||||
[20040130 db] this Allele was previously named snp_Y18D10.2 | |||||
[20090224 db] this Variation was previously named snp_Y18D10[2] | |||||
[20090224 db] original Wicks name : Y18D10A:42409..43201@169 Psnp=0.9173 VarS=AG | |||||
[20090224 db] original Wicks id : vr92a10.s1@104,g,43 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |