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WormBase Tree Display for Variation: WBVar00246819

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Name Class

WBVar00246819EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246819
Other_namesnp_Y18D10A[2]
cewivar00173669
Y18D10A.5.1:c.939+641A>G
HGVSgCHROMOSOME_I:g.12822867A>G
Sequence_detailsSMapS_parentSequenceY18D10A
Flanking_sequencescgggctcgatttttattctgcatttttaatcaaaaaatgagacaataata
Mapping_targetY18D10A
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (16)
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001746
TranscriptY18D10A.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY18D10A.5.1:c.939+641A>G
Intron_number4/5
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9173 VarS=AG
Enzymes. Bristol-specific: [AseI,AsnI,BpoAI,PshBI,Srl55DII,Srl65DI,Srl8DI,Sru4DI,VspI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_Y18D10.2
[20040130 db] this Allele was previously named snp_Y18D10.2
[20090224 db] this Variation was previously named snp_Y18D10[2]
[20090224 db] original Wicks name : Y18D10A:42409..43201@169 Psnp=0.9173 VarS=AG
[20090224 db] original Wicks id : vr92a10.s1@104,g,43
[20090224 db] Snip-SNP
MethodSNP_Wicks