WormBase Tree Display for Variation: WBVar00246568
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WBVar00246568 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246568 | |||
Other_name | snp_W01G7[2] | ||||
W01G7.1.2:c.-8+6932_-8+6935del | |||||
HGVSg | CHROMOSOME_II:g.14045233_14045236del | ||||
Sequence_details | SMap | S_parent | Sequence | W01G7 | |
Flanking_sequences | tttttaattccaaaaattcaataat | gccgacgtaacataacagttcagaa | |||
Mapping_target | W01G7 | ||||
Type_of_mutation | Deletion | GCCT | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00000901 | |||
Transcript | W01G7.1.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01G7.1.2:c.-8+6932_-8+6935del | ||||
Intron_number | 1/7 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9212 VarD4=GCCT | ||||
Enzymes. Bristol-specific: [Cac8I]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_W01G7.2 | |||||
[20040130 db] this Allele was previously named snp_W01G7.2 | |||||
[20090224 db] original Wicks name : W01G7:13776..14631@478 Psnp=0.9212 VarD4=GCCT | |||||
[20090224 db] original Wicks id : yy59h09.s1@317,-,56 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |