WormBase Tree Display for Variation: WBVar00246367

WBVar00246367 Name: Public_name: WBVar00246367
    Other_name: snp_T22H2[1]
      cewivar00170536
      T22H2.2:n.473C>T
    HGVSg: CHROMOSOME_I:g.11706054G>A
  Sequence_details: SMap: S_parent: Sequence: T22H2
    Flanking_sequences: tttgtggctaacaggaaaatgaaag aattaaaaagtaaaattgaatttca
    Mapping_target: T22H2
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (17)
    Laboratory: AX
    Analysis: SNP_Wicks
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01349774
        WBVar01424304
        WBVar01285372
    Status: Live
  Affects: Gene: WBGene00011933
    Pseudogene: T22H2.2 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: T22H2.2:n.473C>T
        cDNA_position: 473
        Exon_number: 3/10
  Reference: WBPaper00004703
    WBPaper00037807
  Remark: Predicted SNP: Psnp=0.6951 VarS=AG
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_T22H2.1
    [20040130 db] this Allele was previously named snp_T22H2.1
    [20090224 db] original Wicks name : T22H2:17487..18406@231 Psnp=0.6951 VarS=AG
    [20090224 db] original Wicks id : vr91h01.s1@187,a,32
  Method: SNP_Wicks