WormBase Tree Display for Gene: WBGene00011933
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| WBGene00011933 | SMap | S_parent | Sequence | T22H2 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | oac-47 | Person_evidence | WBPerson567 | ||||||
| Sequence_name | T22H2.2 | |||||||||
| Molecular_name | T22H2.2 | |||||||||
| Other_name | CELE_T22H2.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | oac-47 | |||||||||
| DB_info | Database | AceView | gene | 1M296 | ||||||
| WormQTL | gene | WBGene00011933 | ||||||||
| NDB | locus_tag | CELE_T22H2.2 | ||||||||
| NCBI | gene | 188764 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 10 Jun 2008 13:50:28 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 18 Jul 2008 14:49:34 | WBPerson2970 | Name_change | CGC_name | oac-47 | |||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | oac | |||||||||
| Allele (66) | ||||||||||
| Strain | WBStrain00032147 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00018142 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00020976 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; hsf-1; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including cadmium; fluoranthene; and Chlorpyrifos based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T22H2.2:wp187 | ||||||||
| T22H2.2:wp192 | ||||||||||
| Corresponding_pseudogene | T22H2.2 | |||||||||
| Experimental_info | Drives_construct | WBCnstr00030270 | ||||||||
| Construct_product | WBCnstr00030270 | |||||||||
| Microarray_results (22) | ||||||||||
| Expression_cluster (30) | ||||||||||
| Interaction | WBInteraction000289038 | |||||||||
| WBInteraction000417072 | ||||||||||
| Map_info | Map | I | Position | 9.59663 | Error | 0.003371 | ||||
| Positive | Positive_clone | T22H2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
