WormBase Tree Display for Variation: WBVar00246315
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WBVar00246315 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00246315 | |||
Other_name | snp_T20G5[5] | ||||
cewivar00151805 | |||||
CE00513:p.Ala29Val | |||||
T20G5.2.1:c.86C>T | |||||
HGVSg | CHROMOSOME_III:g.10216532G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T20G5 | |
Flanking_sequences | ctccttcaaattggtggatccttca | cagatgttgaaagtggagcgacttg | |||
Mapping_target | T20G5 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000833 | |||
Transcript | T20G5.2.1 (12) | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9328 VarS=AG | ||||
Enzymes. Bristol-specific: [Bsp6II,BspKT5I,Eco112I,Eco125I,Eco57I,FsfI]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_T20G5.5 | |||||
[20040130 db] this Allele was previously named snp_T20G5.5 | |||||
[20090224 db] original Wicks name : T20G5:44661..45527@477 Psnp=0.9328 VarS=AG | |||||
[20090224 db] original Wicks id : yx31h07.s1@409,a,47 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |