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WormBase Tree Display for Variation: WBVar00246315

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Name Class

WBVar00246315EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00246315
Other_namesnp_T20G5[5]
cewivar00151805
CE00513:p.Ala29Val
T20G5.2.1:c.86C>T
HGVSgCHROMOSOME_III:g.10216532G>A
Sequence_detailsSMapS_parentSequenceT20G5
Flanking_sequencesctccttcaaattggtggatccttcacagatgttgaaagtggagcgacttg
Mapping_targetT20G5
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000833
TranscriptT20G5.2.1 (12)
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9328 VarS=AG
Enzymes. Bristol-specific: [Bsp6II,BspKT5I,Eco112I,Eco125I,Eco57I,FsfI]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_T20G5.5
[20040130 db] this Allele was previously named snp_T20G5.5
[20090224 db] original Wicks name : T20G5:44661..45527@477 Psnp=0.9328 VarS=AG
[20090224 db] original Wicks id : yx31h07.s1@409,a,47
[20090224 db] Snip-SNP
MethodSNP_Wicks