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WormBase Tree Display for Variation: WBVar00245974

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Name Class

WBVar00245974EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245974
Other_namesnp_R166[6]
cewivar00094363
R166.4.1:c.54+137C>G
HGVSgCHROMOSOME_II:g.10541795G>C
Sequence_detailsSMapS_parentSequenceR166
Flanking_sequencesaaaaacgggaattcccgttcccgtgaaaattttaaaaacgggaattcccgttcccgtgaaaattttaaaaacgggaattcccgttcccgtaaaattttaaaaacgggaattcccgttcccgtgaaaattttaaaaacgggaattcccgttcccgtgaaaacaccccaaaaacgggacaacgggaaaaacgggaaacgggaa
Mapping_targetR166
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisSNP_Wicks
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004185
TranscriptR166.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR166.4.1:c.54+137C>G
Intron_number2/5
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9427 VarS=CG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_R166.6
[20040130 db] this Allele was previously named snp_R166.6
[20090224 db] original Wicks name : R166:14310..15214@190 Psnp=0.9427 VarS=CG
[20090224 db] original Wicks id : eam48e11.s1@200,c,59
MethodSNP_Wicks