WormBase Tree Display for Variation: WBVar00245897

WBVar00245897 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245897
    Other_name: snp_R09E12[3]
      R09E12.1.1:c.531+151A>G
    HGVSg: CHROMOSOME_V:g.779371A>G
  Sequence_details: SMap: S_parent: Sequence: R09E12
    Flanking_sequences: ttgtgtactccgagagaagaagcttgaatgaaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtag catgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcatgtaggcaattaggcatttaggcaattaggcatttaggcatgtagg
    Mapping_target: R09E12
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00019981
    Transcript: R09E12.1.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: R09E12.1.1:c.531+151A>G
        Intron_number: 2/3
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.6508 VarS=AG
    Enzymes. Bristol-specific: [AccI,AflIII,BspLU11I,DsaVI,FblI,Hpy166II,Hpy8I,HpyBII,HpyF14II,HpyF46III,HpyF49III,HpyF50I,HpyF7III,OmiBII,PciI,XmiI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_R09E12.3
    [20040130 db] this Allele was previously named snp_R09E12.3
    [20090224 db] original Wicks name : R09E12:13730..14624@695 Psnp=0.6508 VarS=AG
    [20090224 db] original Wicks id : eam61d03.s1@606,g,31
    [20090224 db] Snip-SNP
  Method: SNP_Wicks