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WormBase Tree Display for Gene: WBGene00019981

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Name Class

WBGene00019981SMapS_parentSequenceR09E12
IdentityVersion2
NameCGC_namesrbc-59Person_evidenceWBPerson522
Sequence_nameR09E12.1
Molecular_nameR09E12.1
R09E12.1.1
CE38093
Other_nameCELE_R09E12.1Accession_evidenceNDBBX284605
Public_namesrbc-59
DB_infoDatabaseAceViewgene5B257
WormQTLgeneWBGene00019981
WormFluxgeneWBGene00019981
NDBlocus_tagCELE_R09E12.1
PanthergeneCAEEL|WormBase=WBGene00019981|UniProtKB=Q5F4U9
familyPTHR46418
NCBIgene187745
RefSeqproteinNM_070923.4
TREEFAMTREEFAM_IDTF315371
TrEMBLUniProtAccQ5F4U9
UniProt_GCRPUniProtAccQ5F4U9
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
203 Feb 2005 11:21:21WBPerson1843Name_changeCGC_namesrbc-59
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrbc
Allele (45)
RNASeq_FPKM (74)
GO_annotation00081302
Ortholog (22)
Paralog (123)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSR09E12.1
Corresponding_CDS_historyR09E12.1:wp138
Corresponding_transcriptR09E12.1.1
Experimental_infoRNAi_resultWBRNAi00017652Inferred_automaticallyRNAi_primary
WBRNAi00051628Inferred_automaticallyRNAi_primary
Expr_patternExpr1024371
Expr1155300
Drives_constructWBCnstr00025450
Construct_productWBCnstr00025450
Microarray_results (13)
Expression_cluster (20)
SAGE_tagSAGE:cgatgaaaaaStrandAntisense
SAGE:ccaaattgccStrandAntisense
SAGE:aggaaaattgStrandAntisense
SAGE:caactctgcattggaacStrandSense
Unambiguously_mapped
InteractionWBInteraction000404162
Map_infoMapVPosition-19.952
PositivePositive_cloneR09E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-19.952)
MethodGene