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WormBase Tree Display for Variation: WBVar00245788

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Name Class

WBVar00245788EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245788
Other_namesnp_R05C11[9]
R05C11.3.1:c.85-18dup
HGVSgCHROMOSOME_IV:g.2084172dup
Sequence_detailsSMapS_parentSequenceR05C11
Flanking_sequencestagaaagccgcgcattctaacttttccgaaaaaaacttccaggtaaatag
Mapping_targetR05C11
Type_of_mutationInsertionT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00019875
TranscriptR05C11.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR05C11.3.1:c.85-18dup
Intron_number2/12
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.4688 VarI1=T
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_R05C11.9
[20040130 db] this Allele was previously named snp_R05C11.9
[20090224 db] original Wicks name : R05C11:37642..38461@360 Psnp=0.4688 VarI1=T
[20090224 db] original Wicks id : yw14d05.s1@336,t,29
MethodSNP_Wicks