WormBase Tree Display for Variation: WBVar00245788
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WBVar00245788 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00245788 | |||
Other_name | snp_R05C11[9] | ||||
R05C11.3.1:c.85-18dup | |||||
HGVSg | CHROMOSOME_IV:g.2084172dup | ||||
Sequence_details | SMap | S_parent | Sequence | R05C11 | |
Flanking_sequences | tagaaagccgcgcattctaactttt | ccgaaaaaaacttccaggtaaatag | |||
Mapping_target | R05C11 | ||||
Type_of_mutation | Insertion | T | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00019875 | |||
Transcript | R05C11.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R05C11.3.1:c.85-18dup | ||||
Intron_number | 2/12 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.4688 VarI1=T | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_R05C11.9 | |||||
[20040130 db] this Allele was previously named snp_R05C11.9 | |||||
[20090224 db] original Wicks name : R05C11:37642..38461@360 Psnp=0.4688 VarI1=T | |||||
[20090224 db] original Wicks id : yw14d05.s1@336,t,29 | |||||
Method | SNP_Wicks |