WormBase Tree Display for Variation: WBVar00245530

WBVar00245530 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245530
    Other_name: snp_K08D9[16]
      K08D9.3a.1:c.1199-171del
      K08D9.3e.1:c.293-171del
      K08D9.3f.1:c.1199-177del
    HGVSg: CHROMOSOME_V:g.3220540del
  Sequence_details: SMap: S_parent: Sequence: K08D9
    Flanking_sequences: aaaacctcatttttgcaaaaaaaaa gccgaataattgtctttttttcatg
    Mapping_target: K08D9
    Type_of_mutation: Deletion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00000168
    Transcript: K08D9.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08D9.3a.1:c.1199-171del
        Intron_number: 7/9
      K08D9.3f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08D9.3f.1:c.1199-177del
        Intron_number: 7/9
      K08D9.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K08D9.3e.1:c.293-171del
        Intron_number: 1/2
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9212 VarD1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_K08D9.16
    [20040130 db] this Allele was previously named snp_K08D9.16
    [20090224 db] original Wicks name : K08D9:21235..22086@664 Psnp=0.9212 VarD1=A
    [20090224 db] original Wicks id : yy60h09.s1@127,-,56
  Method: SNP_Wicks