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WormBase Tree Display for Variation: WBVar00245521

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Name Class

WBVar00245521EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245521
Other_namesnp_K08D9[7]
K08D9.3f.1:c.890-259del
K08D9.3a.1:c.890-259del
HGVSgCHROMOSOME_V:g.3218694del
Sequence_detailsSMapS_parentSequenceK08D9
Flanking_sequencesggaatttctgaaaatcaaaaaaaaatcgatcgaaaacgatacattttgaa
Mapping_targetK08D9
Type_of_mutationDeletionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00000168
TranscriptK08D9.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK08D9.3a.1:c.890-259del
Intron_number6/9
K08D9.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK08D9.3f.1:c.890-259del
Intron_number6/9
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9221 VarD1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_K08D9.7
[20040130 db] this Allele was previously named snp_K08D9.7
[20090224 db] original Wicks name : K08D9:19772..20714@281 Psnp=0.9221 VarD1=A
[20090224 db] original Wicks id : eam67b09.s1@209,-,59
MethodSNP_Wicks