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WormBase Tree Display for Variation: WBVar00245519

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Name Class

WBVar00245519EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00245519
Other_namesnp_K08D9[5]
cewivar00227614
K08D9.3f.1:c.890-304G>A
K08D9.3a.1:c.890-304G>A
HGVSgCHROMOSOME_V:g.3218649G>A
Sequence_detailsSMapS_parentSequenceK08D9
Flanking_sequencesttttttgtagatcaaatcgtaatggacagcccctggcaccgcgtggaatt
Mapping_targetK08D9
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000168
TranscriptK08D9.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK08D9.3a.1:c.890-304G>A
Intron_number6/9
K08D9.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK08D9.3f.1:c.890-304G>A
Intron_number6/9
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9430 VarS=AG
Enzymes. Bristol-specific: [BsmFI,BspLU11III,BstOZ616I]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_K08D9.5
[20040130 db] this Allele was previously named snp_K08D9.5
[20090224 db] original Wicks name : K08D9:19772..20714@236 Psnp=0.9430 VarS=AG
[20090224 db] original Wicks id : eam67b09.s1@165,a,62
[20090224 db] Snip-SNP
MethodSNP_Wicks