WormBase Tree Display for Variation: WBVar00245126

WBVar00245126 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00245126
    Other_name: snp_F55F1[6]
      cewivar00270997
      C14A11.3b.1:c.715-283C>T
    HGVSg: CHROMOSOME_X:g.2779403C>T
  Sequence_details: SMap: S_parent: Sequence: F55F1
    Flanking_sequences: tgtttcaaagcaactaccatactgg ggtacaccacctataaatttttttc
    Mapping_target: F55F1
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022868 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Analysis: SNP_Wicks
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00006496
    Transcript: C14A11.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C14A11.3b.1:c.715-283C>T
        Intron_number: 8/23
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9226 VarS=CT
    Enzymes. Bristol-specific: [AciI]. CB4856-specific [none].
    [20040130 db] this Locus was previously named snp_F55F1.6
    [20040130 db] this Allele was previously named snp_F55F1.6
    [20090224 db] original Wicks name : F55F1:12559..13719@185 Psnp=0.9226 VarS=CT
    [20090224 db] original Wicks id : yy49h07.s2@122,t,44
    [20090224 db] Snip-SNP
  Method: SNP_Wicks