WormBase Tree Display for Variation: WBVar00244598
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WBVar00244598 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244598 | |||
Other_name | snp_F37A4[2] | ||||
F37A4.7d.1:c.505+5928dup | |||||
F37A4.7a.2:c.-6+5928dup | |||||
HGVSg | CHROMOSOME_III:g.6690511dup | ||||
Sequence_details | SMap | S_parent | Sequence | F37A4 | |
Flanking_sequences | agctcgagaccttcaatatttcaaa | tcgtatattcagaacatgatctacg | |||
Mapping_target | F37A4 | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00004316 | |||
Transcript | F37A4.7d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F37A4.7d.1:c.505+5928dup | ||||
Intron_number | 4/20 | ||||
F37A4.7a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F37A4.7a.2:c.-6+5928dup | ||||
Intron_number | 3/21 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.6662 VarI1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F37A4.2 | |||||
[20040130 db] this Allele was previously named snp_F37A4.2 | |||||
[20090224 db] original Wicks name : F37A4:3093..3620@405 Psnp=0.6662 VarI1=A | |||||
[20090224 db] original Wicks id : eam59f09.s1@51,a,33 | |||||
Method | SNP_Wicks |