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WormBase Tree Display for Variation: WBVar00244461

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Name Class

WBVar00244461EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244461
Other_namesnp_F29C4[1]
cewivar00200078
F29C4.7b.1:c.1260-206G>C
F29C4.7a.1:c.1260-214G>C
HGVSgCHROMOSOME_IV:g.122764C>G
Sequence_detailsSMapS_parentSequenceF29C4
Flanking_sequencestctcgattttggttgaggctcacaattttggttgaggctcaaaattttggttgaggctaacaattttggttgaggaaaaaattttggttgaggctaaaaa
Mapping_targetF29C4
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00017929
TranscriptF29C4.7b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C4.7b.1:c.1260-206G>C
Intron_number5/7
F29C4.7a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF29C4.7a.1:c.1260-214G>C
Intron_number5/7
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8657 VarS=CG
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F29C4.1
[20040130 db] this Allele was previously named snp_F29C4.1
[20090224 db] original Wicks name : F29C4:12498..13372@515 Psnp=0.8657 VarS=CG
[20090224 db] original Wicks id : yx29f11.s1@446,g,38
MethodSNP_Wicks