WormBase Tree Display for Variation: WBVar00244079
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WBVar00244079 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244079 | |||
Other_name | snp_F09D1[3] | ||||
F09D1.1.1:c.1657-348dup | |||||
HGVSg | CHROMOSOME_II:g.2575307dup | ||||
Sequence_details | SMap | S_parent | Sequence | F33H12 | |
Flanking_sequences | ggtgagcctaagcctcctgcggaca | gagatttatcagggttgctggtggc | |||
Mapping_target | F33H12 | ||||
Type_of_mutation | Insertion | A | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00017280 | |||
Transcript | F09D1.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F09D1.1.1:c.1657-348dup | ||||
Intron_number | 12/13 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.8227 VarI1=A | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_F09D1.3 | |||||
[20040130 db] this Allele was previously named snp_F09D1.3 | |||||
[20090224 db] original Wicks name : F09D1:9554..10588@492 Psnp=0.8227 VarI1=A | |||||
[20090224 db] original Wicks id : yy56f06.s1@428,a,38 | |||||
Method | SNP_Wicks |