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WormBase Tree Display for Variation: WBVar00244079

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Name Class

WBVar00244079EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00244079
Other_namesnp_F09D1[3]
F09D1.1.1:c.1657-348dup
HGVSgCHROMOSOME_II:g.2575307dup
Sequence_detailsSMapS_parentSequenceF33H12
Flanking_sequencesggtgagcctaagcctcctgcggacagagatttatcagggttgctggtggc
Mapping_targetF33H12
Type_of_mutationInsertionA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00017280
TranscriptF09D1.1.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF09D1.1.1:c.1657-348dup
Intron_number12/13
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8227 VarI1=A
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_F09D1.3
[20040130 db] this Allele was previously named snp_F09D1.3
[20090224 db] original Wicks name : F09D1:9554..10588@492 Psnp=0.8227 VarI1=A
[20090224 db] original Wicks id : yy56f06.s1@428,a,38
MethodSNP_Wicks