WormBase Tree Display for Variation: WBVar00244002
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WBVar00244002 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00244002 | |||
Other_name | snp_E04A4[1] | ||||
E04A4.7.2:c.-9+8T>C | |||||
HGVSg | CHROMOSOME_IV:g.4748960A>G | ||||
Sequence_details | SMap | S_parent | Sequence | E04A4 | |
Flanking_sequences | aagaacaaatttgaaaatattgaca | aatttaccagtcacacaagtcagct | |||
Mapping_target | E04A4 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
Analysis | SNP_Wicks | ||||
Status | Live | ||||
Affects | Gene | WBGene00017121 | |||
Transcript | E04A4.7.2 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | E04A4.7.2:c.-9+8T>C | ||||
Intron_number | 1/4 | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.5508 VarS=AG | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_E04A4.1 | |||||
[20040130 db] this Allele was previously named snp_E04A4.1 | |||||
[20090224 db] original Wicks name : E04A4:21609..22467@617 Psnp=0.5508 VarS=AG | |||||
[20090224 db] original Wicks id : vl29b06.s1@573,g,29 | |||||
Method | SNP_Wicks |