WormBase Tree Display for Variation: WBVar00243863
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WBVar00243863 | Name | Public_name | WBVar00243863 | ||
---|---|---|---|---|---|
Other_name | snp_C54G6[5] | ||||
haw113123 | |||||
cewivar00067438 | |||||
C54G6.3.1:c.393+337T>C | |||||
HGVSg | CHROMOSOME_I:g.997586T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C54G6 | |
Flanking_sequences | ctctcttttgaaggaacattgactt | ttccgttgaaatggataaaaaaatt | |||
Mapping_target | C54G6 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (28) | |||||
Laboratory | AX | ||||
Person | WBPerson4037 | ||||
Analysis | SNP_Wicks | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00532988 | |||
WBVar01295140 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016932 | |||
Transcript | C54G6.3.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C54G6.3.1:c.393+337T>C | ||||
Intron_number | 5/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
WBPaper00037807 | |||||
Remark | Predicted SNP: Psnp=0.9427 VarS=CT | ||||
Enzymes. SNP detectable only by sequencing. | |||||
[20040130 db] this Locus was previously named snp_C54G6.5 | |||||
[20040130 db] this Allele was previously named snp_C54G6.5 | |||||
[20090224 db] original Wicks name : C54G6:5915..6807@744 Psnp=0.9427 VarS=CT | |||||
[20090224 db] original Wicks id : eam61c08.s1@79,c,59 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |