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WormBase Tree Display for Variation: WBVar00243664

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Name Class

WBVar00243664EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00243664
Other_namesnp_C47A10[2]
CE34474:p.Ile281del
C47A10.10.1:c.832_834del
HGVSgCHROMOSOME_V:g.17792823_17792825del
Sequence_detailsSMapS_parentSequenceC47A10
Flanking_sequencesggaccccatgcattgatataataatgcagatgaggtttgtggtgccctga
Mapping_targetC47A10
Type_of_mutationDeletionAAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisSNP_Wicks
AnalysisSNP_Wicks
StatusLive
AffectsGeneWBGene00005493
TranscriptC47A10.10.1VEP_consequenceinframe_deletion
VEP_impactMODERATE
HGVScC47A10.10.1:c.832_834del
HGVSpCE34474:p.Ile281del
cDNA_position832-834
CDS_position832-834
Protein_position278
Exon_number3/3
Codon_changeATT/-
Amino_acid_changeI/-
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.8956 VarD3=AAT
Enzymes. SNP detectable only by sequencing.
[20040130 db] this Locus was previously named snp_C47A10.2
[20040130 db] this Allele was previously named snp_C47A10.2
[20090224 db] original Wicks name : C47A10:36274..37159@564 Psnp=0.8956 VarD3=AAT
[20090224 db] original Wicks id : yy43e04.s1@517,-,44
MethodSNP_Wicks