WormBase Tree Display for Gene: WBGene00005493
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| WBGene00005493 | SMap | S_parent | Sequence | C47A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srh-289 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C47A10.10 | ||||||||
| Molecular_name | C47A10.10 | ||||||||
| C47A10.10.1 | |||||||||
| CE34474 | |||||||||
| Other_name | CELE_C47A10.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srh-289 | ||||||||
| DB_info | Database | AceView | gene | 5S266 | |||||
| WormQTL | gene | WBGene00005493 | |||||||
| WormFlux | gene | WBGene00005493 | |||||||
| NDB | locus_tag | CELE_C47A10.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005493|UniProtKB=Q7YTT6 | |||||||
| family | PTHR22941 | ||||||||
| NCBI | gene | 3565548 | |||||||
| RefSeq | protein | NM_001028540.1 | |||||||
| TrEMBL | UniProtAcc | Q7YTT6 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YTT6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srh | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082606 | ||||||||
| Ortholog | WBGene00063738 | Caenorhabditis remanei | From_analysis | OMA | |||||
| TreeFam | |||||||||
| WBGene00063793 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00086254 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00111586 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
| CSP29.g12131 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP39.g24702 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17552 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (297) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C47A10.10 | |||||||
| Corresponding_transcript | C47A10.10.1 | ||||||||
| Experimental_info | Expr_pattern | Expr1022809 | |||||||
| Expr1146621 | |||||||||
| Drives_construct | WBCnstr00034932 | ||||||||
| Construct_product | WBCnstr00034932 | ||||||||
| Microarray_results | A_12_P114632 | ||||||||
| GPL14144_C47A10.10_81-140_0.896_18_A | |||||||||
| GPL19516_CGZ0009293 | |||||||||
| GPL21109_C47A10.10 | |||||||||
| GPL8304_CE_WBGene00005493_A | |||||||||
| GPL8673_C47A10_10P00382 | |||||||||
| GPL8673_C47A10_10P00417 | |||||||||
| GPL8673_C47A10_10P00428 | |||||||||
| Expression_cluster (13) | |||||||||
| Map_info | Map | V | Position | 13.2035 | Error | 0.000353 | |||
| Positive | Positive_clone | C47A10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026594 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
