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WormBase Tree Display for Variation: WBVar00243489

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Name Class

WBVar00243489EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00243489
Other_namesnp_C35C5[1]
cewivar00275991
C35C5.1.1:c.6589A>G
CE18542:p.Thr2197Ala
HGVSgCHROMOSOME_X:g.11530572A>G
Sequence_detailsSMapS_parentSequenceC35C5
Flanking_sequencescagacatcgagcgatttctacagtgcactcgatagttccggttccggaag
Mapping_targetC35C5
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
AnalysisSNP_Wicks
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004746
TranscriptC35C5.1.1 (12)
ReferenceWBPaper00004703
RemarkPredicted SNP: Psnp=0.9427 VarS=AG
Enzymes. Bristol-specific: [Hpy51I,Hpy8II,Hpy99II,HpyF13I,HpyF1I,HpyF25II,HpyF31II,HpyF34II,HpyF35IV,HpyF36I,HpyF40III,HpyF48I,HpyF49II,HpyF4I,HpyF51I,HpyF62III,HpyF6II,HpyF9I,MaeIII,NmuCI,Tsp45I]. CB4856-specific [none].
[20040130 db] this Locus was previously named snp_C35C5.1
[20040130 db] this Allele was previously named snp_C35C5.1
[20090224 db] original Wicks name : C35C5:1432..2465@679 Psnp=0.9427 VarS=AG
[20090224 db] original Wicks id : yy56c01.s1@292,g,59
[20090224 db] Snip-SNP
MethodSNP_Wicks