WormBase Tree Display for Variation: WBVar00243489
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WBVar00243489 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00243489 | |||
Other_name | snp_C35C5[1] | ||||
cewivar00275991 | |||||
C35C5.1.1:c.6589A>G | |||||
CE18542:p.Thr2197Ala | |||||
HGVSg | CHROMOSOME_X:g.11530572A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C35C5 | |
Flanking_sequences | cagacatcgagcgatttctacagtg | cactcgatagttccggttccggaag | |||
Mapping_target | C35C5 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
RFLP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Analysis | SNP_Wicks | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004746 | |||
Transcript | C35C5.1.1 (12) | ||||
Reference | WBPaper00004703 | ||||
Remark | Predicted SNP: Psnp=0.9427 VarS=AG | ||||
Enzymes. Bristol-specific: [Hpy51I,Hpy8II,Hpy99II,HpyF13I,HpyF1I,HpyF25II,HpyF31II,HpyF34II,HpyF35IV,HpyF36I,HpyF40III,HpyF48I,HpyF49II,HpyF4I,HpyF51I,HpyF62III,HpyF6II,HpyF9I,MaeIII,NmuCI,Tsp45I]. CB4856-specific [none]. | |||||
[20040130 db] this Locus was previously named snp_C35C5.1 | |||||
[20040130 db] this Allele was previously named snp_C35C5.1 | |||||
[20090224 db] original Wicks name : C35C5:1432..2465@679 Psnp=0.9427 VarS=AG | |||||
[20090224 db] original Wicks id : yy56c01.s1@292,g,59 | |||||
[20090224 db] Snip-SNP | |||||
Method | SNP_Wicks |