WormBase Tree Display for Variation: WBVar00243333

WBVar00243333 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243333
    Other_name: snp_C24A1[3]
      C24A1.2b.1:c.694+192del
      C24A1.2a.1:c.697+192del
    HGVSg: CHROMOSOME_III:g.713607del
  Sequence_details: SMap: S_parent: Sequence: C24A1
    Flanking_sequences: aaaatgtaggaaaaactattttttt gtcgacttccaaaactgagtaattg
    Mapping_target: C24A1
    Type_of_mutation: Deletion: T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00016029
    Transcript: C24A1.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C24A1.2b.1:c.694+192del
        Intron_number: 5/6
      C24A1.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C24A1.2a.1:c.697+192del
        Intron_number: 6/8
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9221 VarD1=T
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_C24A1.3
    [20040130 db] this Allele was previously named snp_C24A1.3
    [20090224 db] original Wicks name : C24A1:20965..21764@407 Psnp=0.9221 VarD1=T
    [20090224 db] original Wicks id : vr92a07.s1@338,-,59
  Method: SNP_Wicks