WormBase Tree Display for Variation: WBVar00243289

WBVar00243289 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00243289
    Other_name: snp_C16D6[1]
      H20J18.1f.1:c.-98-550_-98-549insT
      H20J18.1c.1:c.305-550_305-549insT
      H20J18.1a.3:c.-98-550_-98-549insT
    HGVSg: CHROMOSOME_X:g.12514597dup
  Sequence_details: SMap: S_parent: Sequence: C16D6
    Flanking_sequences: gaactgtgattgtattgaaaaaaaa ggcagtcgcacagaatagaaggaaa
    Mapping_target: C16D6
    Type_of_mutation: Insertion: A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
    Analysis: SNP_Wicks
    Status: Live
  Affects: Gene: WBGene00004739
    Transcript: H20J18.1a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H20J18.1a.3:c.-98-550_-98-549insT
        Intron_number: 1/14
      H20J18.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H20J18.1f.1:c.-98-550_-98-549insT
        Intron_number: 1/14
      H20J18.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H20J18.1c.1:c.305-550_305-549insT
        Intron_number: 1/12
  Reference: WBPaper00004703
  Remark: Predicted SNP: Psnp=0.9195 VarI1=A
    Enzymes. SNP detectable only by sequencing.
    [20040130 db] this Locus was previously named snp_C16D6.1
    [20040130 db] this Allele was previously named snp_C16D6.1
    [20090224 db] original Wicks name : C16D6:1263..2235@194 Psnp=0.9195 VarI1=A
    [20090224 db] original Wicks id : eam65c04.s1@115,a,53
  Method: SNP_Wicks