WormBase Tree Display for Variation: WBVar00242379
expand all nodes | collapse all nodes | view schema
| WBVar00242379 | Evidence | Paper_evidence | WBPaper00004772 | ||
|---|---|---|---|---|---|
| Name | Public_name | s2624 | |||
| Other_name | K12H4.8.1:c.49C>T | ||||
| CE47418:p.Gln17Ter | |||||
| HGVSg | CHROMOSOME_III:g.8080226G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | K12H4 | |
| Flanking_sequences | gatttacaatgttttaaccccagggactac | aggtaatttttaagtagcaaaataaattaa | |||
| Mapping_target | K12H4 | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Laboratory | BC | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00000939 | |||
| Transcript | K12H4.8.1 | VEP_consequence | stop_gained,splice_region_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | K12H4.8.1:c.49C>T | ||||
| HGVSp | CE47418:p.Gln17Ter | ||||
| cDNA_position | 56 | ||||
| CDS_position | 49 | ||||
| Protein_position | 17 | ||||
| Exon_number | 2/29 | ||||
| Codon_change | Cag/Tag | ||||
| Amino_acid_change | Q/* | ||||
| Genetics | Interpolated_map_position | III | -0.38443 | ||
| Reference | WBPaper00004772 | ||||
| Method | Substitution_allele |
