WormBase Tree Display for Variation: WBVar00241209
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WBVar00241209 | Evidence | Paper_evidence | WBPaper00006282 | |||
---|---|---|---|---|---|---|
Name | Public_name | qa1811 | ||||
Other_name | CE25153:p.Lys108ArgfsTer20 | |||||
CE48384:p.Lys7ArgfsTer20 | ||||||
W08D2.4d.1:c.20_890delinsGAAAATGGTTGAATCAT | ||||||
W08D2.4a.1:c.323_1193delinsGAAAATGGTTGAATCAT | ||||||
HGVSg | CHROMOSOME_IV:g.9804537_9805860delinsGAAAATGGTTGAATCAT | |||||
Sequence_details | SMap | S_parent | Sequence | W08D2 | ||
Flanking_sequences | aagaaaagaaaatggttgaatcattcgaaa | tgcttgcatgaaatatgtgaaagaatggtg | ||||
Mapping_target | W08D2 | |||||
Type_of_mutation | Insertion | GAAAATGGTTGAATCAT | Paper_evidence | WBPaper00006282 | ||
Deletion | ||||||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Laboratory | XA | |||||
Status | Live | |||||
Affects | Gene | WBGene00001395 | ||||
Transcript | W08D2.4d.1 (11) | |||||
W08D2.4a.1 (11) | ||||||
W08D2.4b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
cDNA_position | ?-419 | |||||
CDS_position | ?-419 | |||||
Protein_position | ?-140 | |||||
Intron_number | 1-2/2 | |||||
Exon_number | 1-3/3 | |||||
W08D2.4c.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
cDNA_position | ?-95 | |||||
CDS_position | ?-95 | |||||
Protein_position | ?-32 | |||||
Intron_number | 1/1 | |||||
Exon_number | 1-2/2 | |||||
Genetics | Interpolated_map_position | IV | 4.42133 | |||
Reference | WBPaper00006282 | |||||
Method | Deletion_and_insertion_allele |