WormBase Tree Display for Variation: WBVar00241014
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| WBVar00241014 | Evidence | Paper_evidence | WBPaper00001824 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | q122 | |||||
| Other_name | C15F1.3a.1:c.*89_*120del | ||||||
| HGVSg | CHROMOSOME_II:g.6955499_6955530del | ||||||
| Sequence_details | SMap | S_parent | Sequence | F22D3 | |||
| Flanking_sequences | TTTCTATTATTTGTACAATTTCCATTTCAT | TATTTAATTTCTTATCTACTCATATCTAAT | |||||
| Mapping_target | F22D3 | ||||||
| Type_of_mutation | Deletion | ||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00022522 | ||||||
| Laboratory | JK | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006605 | |||||
| Transcript | C15F1.3a.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | ||||||
| HGVSc | C15F1.3a.1:c.*89_*120del | ||||||
| cDNA_position | 4517-4548 | ||||||
| Exon_number | 24/24 | ||||||
| Genetics | Interpolated_map_position | II | 0.150004 | ||||
| Description | Phenotype | WBPhenotype:0000682 | Paper_evidence | WBPaper00001037 | |||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | XX animals are female in the germ line. ql22gf X0 animals are generally unaffected, although old males show some oogenesis and yolk synthesis. | Paper_evidence | WBPaper00001037 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Hypermorph_gain_of_function | Paper_evidence | WBPaper00001037 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Reference | WBPaper00001037 | ||||||
| WBPaper00001824 | |||||||
| Remark | e2046, q122, and q244 all carry the same molecular change but were produced by different labs independently. WormBase has a policy to merge identical naturally occurring polymorphisms in wild isolates, but maintain separate records for mutants. | ||||||
| Method | Deletion_allele |
