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WormBase Tree Display for Variation: WBVar00239358

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Name Class

WBVar00239358EvidencePaper_evidenceWBPaper00004923
NamePublic_namepk1351
Other_nameK12H4.8.1:c.1333-22_2509del
HGVSgCHROMOSOME_III:g.8076515_8078143del
Sequence_detailsSMapS_parentSequenceK12H4
Flanking_sequencesaaactgaagtaaatttatgtttaaattatctgtcctacacaatcaacatgaaatatgtat
Mapping_targetK12H4
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00028914
WBStrain00054693
LaboratoryNL
StatusLive
AffectsGeneWBGene00000939
TranscriptK12H4.8.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScK12H4.8.1:c.1333-22_2509del
cDNA_position?-2516
CDS_position?-2509
Protein_position?-837
Intron_number9-15/28
Exon_number10-16/29
GeneticsInterpolated_map_positionIII-0.385538
ReferenceWBPaper00004923
RemarkPublished as pk1531 which is a typographical error.Paper_evidenceWBPaper00004923
Curator_confirmedWBPerson2970
MethodDeletion_allele