WormBase Tree Display for Variation: WBVar00229896
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WBVar00229896 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00229896 | |||
Other_name | pas41672 | ||||
cewivar00094899 | |||||
F45E10.1a.1:c.31-2023T>C | |||||
F45E10.1c.1:c.31-2023T>C | |||||
F45E10.1b.1:c.31-2023T>C | |||||
F45E10.1g.1:c.31-2023T>C | |||||
F45E10.1h.1:c.31-2023T>C | |||||
HGVSg | CHROMOSOME_II:g.11085982A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C09H10 | |
Flanking_sequences | aggaaggcctagaatagaagtaaagcgcagtcaaaactatttctaacagaacgaaaaagaaaatggaagccagagaactcattgccgaagagctggagatgtagtgggtgtgtgttcgccaaaggtgaattccctggacgatgagagagtgtgggagacgaagagaattagatgaaaatgaagataagggagaactctttcgcctcatctggagaatcaattggtttgatggaagacgacaggagacgttgtacgtccatttctcagcaaattttaaacctttcagattggaggggtggg | cggtggacacatttcttgaagttacagctagaaagttaattggagtttctcagaaaaaacacacagatcgtttcagaaaatttatgaataacgtgtctgactacacttcaggagtgggctgcagattgctggtttgccggtttgccgattttcccaaaattttgatttttggccaattatagctgtttctcgaaaatcaatttgccgttttttttataagacggaaacacttaaaactgtgactttttgaattttttttgccgttttttctggatattttcatagaatttgcttacgttt | |||
Mapping_target | C09H10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (37) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01244491 | |||
WBVar01311371 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006788 | |||
Transcript | F45E10.1c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F45E10.1c.1:c.31-2023T>C | ||||
Intron_number | 1/23 | ||||
F45E10.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45E10.1b.1:c.31-2023T>C | ||||
Intron_number | 1/22 | ||||
F45E10.1g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45E10.1g.1:c.31-2023T>C | ||||
Intron_number | 1/21 | ||||
F45E10.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45E10.1a.1:c.31-2023T>C | ||||
Intron_number | 2/23 | ||||
F45E10.1h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F45E10.1h.1:c.31-2023T>C | ||||
Intron_number | 1/21 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |