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WormBase Tree Display for Variation: WBVar00229896

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Name Class

WBVar00229896EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00229896
Other_namepas41672
cewivar00094899
F45E10.1a.1:c.31-2023T>C
F45E10.1c.1:c.31-2023T>C
F45E10.1b.1:c.31-2023T>C
F45E10.1g.1:c.31-2023T>C
F45E10.1h.1:c.31-2023T>C
HGVSgCHROMOSOME_II:g.11085982A>G
Sequence_detailsSMapS_parentSequenceC09H10
Flanking_sequencesaggaaggcctagaatagaagtaaagcgcagtcaaaactatttctaacagaacgaaaaagaaaatggaagccagagaactcattgccgaagagctggagatgtagtgggtgtgtgttcgccaaaggtgaattccctggacgatgagagagtgtgggagacgaagagaattagatgaaaatgaagataagggagaactctttcgcctcatctggagaatcaattggtttgatggaagacgacaggagacgttgtacgtccatttctcagcaaattttaaacctttcagattggaggggtgggcggtggacacatttcttgaagttacagctagaaagttaattggagtttctcagaaaaaacacacagatcgtttcagaaaatttatgaataacgtgtctgactacacttcaggagtgggctgcagattgctggtttgccggtttgccgattttcccaaaattttgatttttggccaattatagctgtttctcgaaaatcaatttgccgttttttttataagacggaaacacttaaaactgtgactttttgaattttttttgccgttttttctggatattttcatagaatttgcttacgttt
Mapping_targetC09H10
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (37)
LaboratoryAX
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01244491
WBVar01311371
StatusLive
AffectsGeneWBGene00006788
TranscriptF45E10.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1c.1:c.31-2023T>C
Intron_number1/23
F45E10.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1b.1:c.31-2023T>C
Intron_number1/22
F45E10.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1g.1:c.31-2023T>C
Intron_number1/21
F45E10.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1a.1:c.31-2023T>C
Intron_number2/23
F45E10.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF45E10.1h.1:c.31-2023T>C
Intron_number1/21
ReferenceWBPaper00037807
MethodWGS_Pasadena_Quinlan