WormBase Tree Display for Variation: WBVar00225828
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| WBVar00225828 | Name | Public_name | WBVar00225828 | ||
|---|---|---|---|---|---|
| Other_name | pas37604 | ||||
| cewivar00091884 | |||||
| F35D2.16:n.238T>C | |||||
| F35D2.5a.1:c.180+1021A>G | |||||
| HGVSg | CHROMOSOME_II:g.7593546T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | R07G3 | |
| Flanking_sequences | aaaaagaaatgagggaagaagtagaagaagaagaaaacggcgatggaatggagaaggaagagactggtgatggcgacgacggcttctccttcttcgtcggagcttcgtcggtggcctcgtcgccatccgtctatcgatctcgtttccttttagtttcgagtgggcacacacatatacacacacaagtcgccgttgctctctcgtctccgcgcagttcagatagacggcatagaaatttgtgatacgcagagggagatagagcggaccaagttgagccaacggctactagcttcttcttcg | cctcttctttatacttctccatctctcctcttgtttcccatagtagtagccgctgttgagtcactctctgggagacatgctctttcgttgctcatgcacaaaacgacgtccccccccccgtagatttcgaatcaagttcagctcacaccaaacgacatcgaccctcttcgtcttcttccgcaaagacttctcattattatatttaaaatgtacccacatcaaggattaccatagaagacgaatgagaatatatattagaacttgaatcacattgaaacactttctaagacatacatatta | |||
| Mapping_target | R07G3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00201549 | |||
| WBGene00006363 | |||||
| Transcript | F35D2.16 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35D2.16:n.238T>C | ||||
| cDNA_position | 238 | ||||
| Exon_number | 1/1 | ||||
| F35D2.5a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F35D2.5a.1:c.180+1021A>G | ||||
| Intron_number | 3/18 | ||||
| Method | WGS_Pasadena_Quinlan |
