WormBase Tree Display for Variation: WBVar00221161
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WBVar00221161 | Name | Public_name | WBVar00221161 | ||
---|---|---|---|---|---|
Other_name | pas32937 | ||||
cewivar00088890 | |||||
Y8A9A.2.1:c.1805+22A>T | |||||
HGVSg | CHROMOSOME_II:g.3797654A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y8A9A | |
Flanking_sequences | cagcacatccactgattctaccacgactgagtcaacaagcacatccactgattccaccacgaccgagtcgacgagcacttcgactgattctaccacaactgaagttactactactgcgtctgactcttcaacgacagtgccaagaactgcatgctgtccatctggaggtttctggagtgaatggactgctgacgctccttgcgctacaacatgtggatcttgttcacaacaagtctacagacgtgtttgccttactgaagctgattgtggagcatgcacgtatgtttatcttgtacctat | cgtttttgaagcaacttttttcaggggagctgatgtcaagatccaaaattgcaatgtcggagtctgctacttccctcttgattcttgctgtgctggctataccgctactgtttccggaactcttcatatttgtggcccacaggtatagcgaacagtgattttgtgttgttatcttcagataattttcagccaactacaacaactccagcccccaacgatgagacatgctgtcctcttgatggtatttggggtgcttggggagaatggtcggtatgcaccggtacaacttgcggcaactgt | |||
Mapping_target | Y8A9A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021171 | |||
Transcript | Y8A9A.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y8A9A.2.1:c.1805+22A>T | ||||
Intron_number | 5/18 | ||||
Method | WGS_Pasadena_Quinlan |