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WormBase Tree Display for Variation: WBVar00216742

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Name Class

WBVar00216742NamePublic_nameWBVar00216742
Other_namepas28518
cewivar00115767
R12H7.1a.1:c.113-165A>G
R12H7.1a.2:c.113-165A>G
HGVSgCHROMOSOME_X:g.13212808A>G
Sequence_detailsSMapS_parentSequenceR12H7
Flanking_sequencesagcttaactactattacaccacagccattatcacaggtattcttttcttaaataaaatgtatcaaactttttgatgaaacatagcatactggtttacaaaaaaacacatgaaagagaaccgaaaaggtttaaaatgaaaataaatcttcatgaattagtacccattaaccaaggaccaaggacttgctctccctttcattttgttacatttttgatcaaagatgtttccaatcaagcatgtgtttctgaaccgttgggaagtattgaaatagaaaaagtttgaaataaatgttttgaagggcttgaaatcaaaaaatcatttgataaaatagacattgaaaaagaaattcaacattaattatggcaattttgaagccataaaaaaacacgtctctagttcatattatctatctcccgttctcccatataaatgaatttttctccaataatttcttaattttcagtgttcgcgattctcgtctctgctaaacagtatgtcggtaagaccaaacattttctatcatattctcactgtcaacaaaccttttctaggttttccaatccaatgttgggtacctgcgacgttcaccgagcccatgg
Mapping_targetR12H7
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (15)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006749
TranscriptR12H7.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR12H7.1a.2:c.113-165A>G
Intron_number3/10
R12H7.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR12H7.1a.1:c.113-165A>G
Intron_number2/9
MethodWGS_Pasadena_Quinlan