WormBase Tree Display for Variation: WBVar00216738
expand all nodes | collapse all nodes | view schema
WBVar00216738 | Name | Public_name | WBVar00216738 | ||
---|---|---|---|---|---|
Other_name | pas28514 | ||||
cewivar00115759 | |||||
R12H7.1a.2:c.-42-2335T>A | |||||
HGVSg | CHROMOSOME_X:g.13210055T>A | ||||
Sequence_details | SMap | S_parent | Sequence | R12H7 | |
Flanking_sequences | atgcgacgagactactacaaattgaaattgagagctggaagatgggaacaattttcatggttcggtcttaaaaatctggttttctgacttgtttcaagaaaatacctttctacgaagaaaagtaaatcaggatataattttcagtttttcaattagtgatagtttgaaacttgcaagggaatcgattgcttagagagacagtcaatttgaaaacttccaaaaaatatttgaaatgttaaaatcaatgctcaaaagtaagattcgagcttcacataaagcaagatgcttatgatttttttt | aattttataactttcgtactattttagtattcaaagttaataattaaacagatcaggttcccctttaatgtttgttcactagattttccggtgtgatctatcatttgagtctttttttttattccgtaatgacttctcacattgttccaactctgctaggttgaacaaattcgttttacaagcacggagtacgtgtaggtgcttatttaaaaagtttatgtaagtacgttgaccgtaccttatcacgcaatattttgtttatttatctgaaattttctgtgcaaatatagctaatgaaac | |||
Mapping_target | R12H7 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (25) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006749 | |||
Transcript | R12H7.1a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R12H7.1a.2:c.-42-2335T>A | ||||
Intron_number | 1/10 | ||||
Method | WGS_Pasadena_Quinlan |