WormBase Tree Display for Variation: WBVar00214563
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| WBVar00214563 | Name | Public_name | WBVar00214563 | ||
|---|---|---|---|---|---|
| Other_name | pas26339 | ||||
| snp_F09D1[1] | |||||
| cewivar00005794 | |||||
| F09D1.1.1:c.1657-443A>T | |||||
| HGVSg | CHROMOSOME_II:g.2575212A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F33H12 | |
| Flanking_sequences | tggcctaaattaccctacaatttgcttaaatccggcttaaattttgctaaaatttagcttaaattcggcttaaaattccctaaatttttactgattttaccctaaaattggcttaagttcggcccaaaatctggcttaaaataggcataaaatttagctgaaattcggcttaaattacccaattaattaaaatttaaaattggcttaagctcggcccaaaatctggctgaaatagcccgcaatttggctcaaattcggcttaagttcggcccaaaatttggcttaaattaggcataaaat | tagctgaaattcgacttaaattaccctaaaattggtaaaaaaaaggtaaaggttgtccgtttggtttaagggtgagcctaagcctcctgcggacagagatttatcagggttgctggtggcgtttatatctcttctagtctgaatttaagccgtaccgggactagcggtatggccgatttacctttcgtgaaccaaattcactaaccactttccgagccggcttaagctcggcccaaaatctggctggaatagcccgcaattaggctcaaattcggcataagttcggcttaaaatttggtt | |||
| Mapping_target | F33H12 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (19) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01364338 | |||
| WBVar01233287 | |||||
| WBVar01299125 | |||||
| WBVar00244077 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00017280 | |||
| Transcript | F09D1.1.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F09D1.1.1:c.1657-443A>T | ||||
| Intron_number | 12/13 | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
