WormBase Tree Display for Variation: WBVar00210544
expand all nodes | collapse all nodes | view schema
| WBVar00210544 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00210544 | |||
| Other_name | haw77820 | ||||
| haw166948 | |||||
| cewivar00235227 | |||||
| CE13277:p.Ala187Ser | |||||
| T05H4.5.1:c.559G>T | |||||
| HGVSg | CHROMOSOME_V:g.6437360G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T05H4 | |
| Flanking_sequences | agttttcaagcatctttccatgatt | ctggaggaaccggaatcacaccaat | |||
| Mapping_target | T05H4 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00586813 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00305583 | |||
| WBGene00020268 | |||||
| Transcript | T05H4.17 | ||||
| T05H4.5.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | T05H4.5.1:c.559G>T | ||||
| HGVSp | CE13277:p.Ala187Ser | ||||
| cDNA_position | 561 | ||||
| CDS_position | 559 | ||||
| Protein_position | 187 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | Gct/Tct | ||||
| Amino_acid_change | A/S | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw77820 | ||||
| Method | WGS_Hawaiian_Waterston |
