WormBase Tree Display for Variation: WBVar00205936
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WBVar00205936 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00205936 | |||
Other_name | haw73212 | ||||
haw163545 | |||||
cewivar00227622 | |||||
K08D9.3f.1:c.1199-589C>T | |||||
K08D9.3a.1:c.1199-583C>T | |||||
K08D9.3e.1:c.293-583C>T | |||||
HGVSg | CHROMOSOME_V:g.3220128C>T | ||||
Sequence_details | SMap | S_parent | Sequence | K08D9 | |
Flanking_sequences | aaaaaaaaacacaaaatcctaattt | atcagaaaataaaaaaacaacatta | |||
Mapping_target | K08D9 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00583410 | |||
Status | Live | ||||
Affects | Gene | WBGene00000168 | |||
Transcript | K08D9.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K08D9.3a.1:c.1199-583C>T | ||||
Intron_number | 7/9 | ||||
K08D9.3f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K08D9.3f.1:c.1199-589C>T | ||||
Intron_number | 7/9 | ||||
K08D9.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K08D9.3e.1:c.293-583C>T | ||||
Intron_number | 1/2 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw73212 | ||||
Method | WGS_Hawaiian_Waterston |